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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … species and plant-microbe interactions, advancing efforts to create renewable energy sources and bolster …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual … 175     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … for us to build a basic database structure and a basic web interface. And we could then show that to collaborators …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … just depends on lifestyle.  ALISON: Okay. It’s such a dynamic part of their lives. Sounds like. DAN: Literally, … to its mouth. We’ll have to put a picture of this on the website.  DAN: I guess looking at these is kind of like …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   The Impact This dataset … By making the tools and data available through MycoCosm — a platform widely used across the research community — the …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … Episode Transcript … This is the first episode of Natural Prodcast, a podcast produced by the US Department of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust … The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based industrial products.    … This work was supported by the Department of Energy (DOE) Office of … support from the Gordon and Betty Moore Foundation (to SSM) for the work on  A. symbiontica (9203). RJC was supported …
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Natural Prodcast Episode 18: A CSP Primer
… DAN UDWARY: It’s been a while, but Natural Prodcast is back … more, then I really encourage you to head over to JGI’s website at  jgi.doe.gov , and then click on the User … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Episode Transcript … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … While are still working on finalizing the tree and related publication the tree is still in development and not … of the portal. 14.  Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …
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