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… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of … pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …

… You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … proposal calls and proposal submission, as well as examples of approved proposals, please visit the Proposals FAQ .  …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… As an Integrative Genome Science User Facility, the JGI plays a leadership … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … connect genes and infer changes in gene function across the phylogeny — and link these into our DOE crop plants, so we …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … This is episode 4 of Natural Prodcast, our interview with Dr Nancy Keller from …

… Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship … was an opportunity to adapt my existing skill set to a new scale, which presented a host of interesting and ultimately … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …

… I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … a question about the complexity of the problem so and the scale. So thinking about 33,000 plants, how many plants …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … With so many fungal  genomes , the team conducted a large-scale comparison, charting several changes caused by the … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. … The DNA Synthesis Science Advisory Committee is chartered to offer advice, guidance and counsel on the effective …