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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Igor Grigoriev (Cross-field) Natalia Ivanova (Biology and Biochemistry) Nikos Kyrpides (Biology and Biochemistry) Dan … called iPHoP , which combines and evaluates multiple predictions to reliably match viruses with their archaea and …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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The central role of selenium in the biochemistry and ecology of the harmful pelagophyte, Aureococcus anophagefferens
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of … collaborators’ landmark genome mining paper: “A genomics-guided approach for discovering and expressing cryptic …
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … and improve results. Applying this method to the study of a particular fungi, researchers identified novel …
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a … countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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