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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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Plant Microbial Interactions Group
… viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered tools to study this … viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene expression …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … the UC Kearney Agricultural Research and Extension Center. 2017: The JGI and collaborators sequence and annotate the …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of that first … Cas9 with increased lifetime in human plasma. Nat Commun. 2017 Nov 10;8(1):1424. doi: 10.1038/s41467-017-01408-4. …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … so go nuts. But here, in this first episode you’ll meet me, and my co-host, Alison. We’ll tell you some stories … between biochemistry and synthetic chemistry. And I did postdoctoral work with Brad Moore who we’re going to talk to …
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10 From JGI on the 2019 Highly Cited Researchers List
… has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined … of the JGI plant portal Phytozome, which is overseen by 2017 Highly Cited Researcher David Goodstein. Go here to …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring … energy — and its implications for carbon sequestration, renewable energy and agricultural productivity. Research spans …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This … Microbiology and Biotechnology (SIMB) Natural Products meeting earlier this year. And today we have our … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated with an ITS project … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, … and that city is where I first met Roger, when we were both postdocs at Scripps Institution of Oceanography. Roger was … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … with Chlamy began in her early days as a Harvard postdoc. While she had intended to work on cyanobacteria, …
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