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CSP Large Scale Call
Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, … approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and … and Environmental Research (BER) missions .  While applications will be accepted that address any aspect of these …
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The More the Merrier: Making the Case for Plant Pan-genomes
… merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each … or more genome copies from additional parents or duplication, also known as “polyploidy,” is common among flowering plants; at least once during their evolution, the genomes of …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … of harnessing large datasets, JGI researchers and users are looking for ways of making these experiments more repeatable … and the JGI.  With input from this group, as well as feedback from researchers around the world, the team have now …
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Aerobic bacterial methane synthesis
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … heavily reliant on the energy and nutrient flows that the microbes in these bodies of water help regulate. However, …
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living organisms as had been originally … The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes …
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Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … NEON sampling. … SIP Technologies at EMSL and JGI provides background on the various isotope-related technologies …
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Marine Microbe Contains Multitudes
In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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