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Soil virus offers insight into maintaining microorganisms
… effort, researchers have identified a protein in soil viruses that may promote soil health. The work was … of genetic diversity and capable of transferring genes from one host microbe to another, which can have a … the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis team synthesized and cloned both chitosanase …
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Metabolomics Technology Group
… based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial …
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… of data sequenced — that’s three-quadrillion base pairs of DNA sequence! To meet this “ data tsunami ,” as Kathy Yelick … users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create …
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Project Management Office
… Nancy Hammon Workflow Planning Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… the required capabilities, they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for … and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … which it becomes publicly available. If you're requesting DNA synthesis from JGI, there's also a material transfer …
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Individual genome assembly from complex community short-read metagenomic datasets
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Secondary Metabolites Program
… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … sigma factor-target pairs twofold. We are also utilizing DNA-Affinity Purification (DAP) sequencing to express …
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Natural Prodcast Episode 16: Marcy Balunas
… that there wasn’t enough application there. And so I moved from there to plant natural products, getting a PhD in … And so I ended up as a postdoc Panama as part of the international cooperative biodiversity group (ICBG) based in … local environments, and so they don’t transfer a lot of DNA back and forth, especially across species. And so then …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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DAS Tool for Genome Reconstruction from Metagenomes
… and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in …
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