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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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DOE Metrics
… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …
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DAS Tool for Genome Reconstruction from Metagenomes
… genomes, particularly from incredibly complex soil microbial communities, is crucial to understanding how these … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness …
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Logos and Templates
… The JGI Style Guide offers tips on JGI logo usage - please follow these …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) … functional assay lets us move beyond cataloging the genes of microorganisms and start making quantitative measurements …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a … publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts of standardized …
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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Nobel Foundation as having “a revolutionary impact on the life sciences.” Building upon CRISPR-Cas9 work, the Doudna … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … the traditional sort of academic path or even just the scientific path of “I know exactly what I’m going to do and I’m … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … did those sequences go? Like, what are the other scientific tools we offer people? TANJA WOYKE: Yeah. Also a really good …
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