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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … did those sequences go? Like, what are the other scientific tools we offer people? TANJA WOYKE: Yeah. Also a really good …
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our core … Looking for BBTools? Find it here.  …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new … advancements enabled by artificial intelligence and other tools. By bringing users together through our systems, we … Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley Lab team comprised of JGI … to assemble, for the first time these large environmental  microbial data sets for JGI users, which include projects …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) Symposium … The JGI is represented at conferences year round; find out where …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … their work, while also adhering to the authorship policies of the journal in which the research is published. The JGI … Upon request, JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of different organisms that … Fleming produced when he discovered – or was on the road to discovering – penicillin. So what we see here in this …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … furnish greater definition of the roots of the tree of life on Earth, and their broad distribution suggests …
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