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Natural Prodcast Episode 10: A Primer on Genome Mining
… it’s like these molecules can just mediate so many kinds of interactions. And by understanding them, we can promote the … metabolism genes don’t look like the genes in their host. And so, sometimes those kinds of things get lost in … at naturalprodcast.com. Special thanks, as always, to my co-host, Alison Takemura. ALISON TAKEMURA: Whoo. DAN UDWARY: If …
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Natural Prodcast Episode 20: Brian Bachmann
… to join me in mentally welcoming Natural Prodcast’s new co-host, another old friend of mine, Professor Jaclyn Winter , … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions by … be soluble. Sometimes it won’t be active in a heterologous host. So what you really need is a large tool kit of pieces …
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Fungal Friends or Foes in Plant Roots
… between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … . They looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… symbiont, for example, of an ant. So these are very stable interactions that have been evolving for 300 million years, … the producing organism and strong interactions and the host or even in tripartite systems. So, in those cases, it’s … at naturalprodcast.com. Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …
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Simon Roux
… of new experimental approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral … foundational knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early … genomes. Nature biotechnology 39, 578-585. Roux et al., 2019. Cryptic inoviruses revealed as pervasive in bacteria …
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Intra‐species genetic variability drives carbon metabolism and symbiotic host interactions in the ectomycorrhizal fungus Pisolithus microcarpus
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In … that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, …
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Virus-Microbe Interactions of Mud Island Mangroves
… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove … “In terms of my project, I wanted to incorporate that CSP, but also look at how viruses might be influencing the …
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Frederik Schulz
Dr. Schulz is leading a DTRA-funded program on agnostic pathogen detection and surveillance in complex samples. … … 39, 499-509. Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 …
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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
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Computationally Classifying Fungal Lifestyles
… from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and … insights into how these fungi have adapted to stress and host specificity, particularly regarding the effects of … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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