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Jeremy Schmutz
… and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … descriptions across the plant kingdom. Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Clustering Categorical Data
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A More Intuitive Phytozome Interface
… updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. Below …
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Annual Meeting 2027
… in March 2027 at the Oakland Convention Center. Check this page as further details become available. Sign up for our …
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JGI Announces 2023 Community Science Program Awardees
… very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a … and we look forward to facilitating their success. “ The CSP Annual Call is focused on large-scale genomic science … (Courtesy of Mary-Cathrine Leewis) This year’s annual CSP call had five areas of emphasis: genes to function, …
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Ancient Algae Reveal Secrets of Plant Evolution
… US National Science Foundation (NSF) CAREER award (DBI-1652164, 1933521), the Nebraska Tobacco Settlement Biomedical Research … the Joint Genome Institute Community Science Program (CSP), the United States Department of Agriculture (USDA) …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, … the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems …
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Virus-Microbe Interactions of Mud Island Mangroves
… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove … his time with the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 … of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Programs & Platform Leads
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JGI & KBase at PAG XXVII
… DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and … for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex Chromosomes in the Moss Ceratodon … Response 7:27 PM Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  …
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