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Natural Prodcast Episode 10: A Primer on Genome Mining
… in this kind of a vein. We sequenced in the end about 150,000 genomes, just to look for a very specific class of … Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) DAN UDWARY: Yeah, I think that might be a …
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How Maize Makes An Antibiotic Cocktail
… zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to find. … feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. Moreover, zealexin biosynthetic enzymes would … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …
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Fungal Friends or Foes in Plant Roots
… work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing of ecologically relevant …
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Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)
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Membrane lipid and expression responses of Saccharolobus islandicus REY15A to acid and cold stress
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Natural Prodcast Episode 8: Eric Schmidt
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … the heavy lifting to make the metabolites, are there any plans to add proteomic data to the metabolomic and … see this  Metabolomics Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile …
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Webinar: SIP technologies at EMSL and JGI
… collection. 4. Q: Are there existing narratives, or plans to develop narratives in KBase for SIP studies? I’d be … future. 5. Q: How well-suited is the LA-IRMS for tracking N15? The example in the presentation was with C13.  A:  Yes, EMSL can look at N15 as well as C13 as well as other isotopes using the IRMS. …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Reclassification of the Clostridium clostridioforme and Clostridium sphenoides clades as Enterocloster gen. nov. and Lacrimispora gen. nov., including reclassification of 15 taxa.
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The JGI announces 2024 awardees for our Community Science Program annual call
… “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, who heads JGI’s … and I look forward to seeing their outcomes.” The annual CSP call is focused on large-scale genomic science projects … here on our website . See below for the full list of 2024 CSP Annual Call awardees. …
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JGI Portals
… metagenomes, and metatranscriptomes. It features over 15 million viral genomes and fragments, enriched with …
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