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… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … types, and analytical protocols that permit gene expression analysis across plants and add additional experimentally … time course data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … large polyploid genome, which means most genes are found as multiple copies across the chromosomes. In a follow-up study …

… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … synthesis and other omics technologies with computational analysis and prediction. Together, and in an integrated …

… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user facilities through the FICUS research …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to … Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the …

… into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis is one of …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … are available. The genome assemblies highlight the multiple advances in sequencing technologies applied to the … Study of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the …

… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … Many plants, sugarcane included, are polyploid and have multiple copies of chromosomes. Sugarcane accounts for 80% … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …

Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering …