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An Enzyme System to Help Catalyze Bioproduction of Plastic
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Genomes to Structure and Function focus area of the JGI’s DNA Synthesis Science Program help advance DOE … interests in the biotechnology innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the …
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Digging into Microbial Ecosystems Deep Underground
… deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … have tapped into the resources and capabilities of both the JGI and the Environmental Molecular Science Laboratory …
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How Filamentous Fungi Sense Food
… and decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… flavor of wine, terpenes are ubiquitous. A diverse group of plant-produced organic compounds, terpenes play key roles in plant growth, defense, and environmental interactions. … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …
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Building Wet and Dry Lab Skills
… Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  … on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … Alabama A&M majoring in Biology, and I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomic capabilities. Summary In a project supported by the JGI Community Science Program, University of California (UC) …
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A Model System for Perennial Grasses
… research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey …
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Doubling Down on Known Protein Families
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … proteins with massively parallel computations.”  Guided by JGI scientists, the team embarked on a mission to unveil the … Nikos Kyrpides , senior author of the study and head of the JGI’s  Microbiome Data Science group . Shining a Light on …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and … his time with the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career …
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