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JGI Welcomes New UEC Members
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect … procedures and the organization of the JGI Annual Meeting. Any investigator who has been an active user of the JGI …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … is committed to advancing genomics in support of DOE missions related to clean energy generation and …
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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A Powerful Technique to Study Microbes, Now Easier
Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial …
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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification … classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … also carries out custom preparative work for difficult user projects, including those that require fluorescence … in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, … the way. Eventually, the goal is to create an entirely human-generated yeast genome. …
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that … they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic …
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