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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, … in the biofuel and synthetic biology fields. In a living cell, triplets of nucleotides, or codons, dictate which … into why fungi have been so evolutionary and ecologically successful,” Wint said. “Fungi play an important role in the …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… the UC Merced School of Natural Sciences in honor of the occasion. To a packed conference room of this year’s program … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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Atif Shahab
… for large-scale sequencing projects and data analysis pipelines.  …
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Extracting the Secrets of Secondary Metabolites
… Short Palindromic Repeats) is the leading tool for accurately editing genomes, its effectiveness has … in 2019. Now, that power is poised to grow exponentially by combining it with CRISPR.  By employing CRAGE, … That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. …
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Igor Grigoriev
… geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized … development reveals conserved genes behind complex multicellularity in fungi. Proc Natl Acad Sci U S A. … Ecol Evol . 3(4):668-678. Ahrendt et al (2018) Leveraging single-cell genomics to expand the fungal tree of life.  …
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JGI@25: Using Team Science to Build Communities Around Data
… in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) … another 100 genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. … DOE crop plants, so we can learn from evolution that has occurred throughout plant history.”   …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… mentor Atif Shahab Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan … possible to do amazing things. And it made me explore every single possibility. And also specifically, it sparked my … and I look forward to keeping them in my network.      Byline: Ashleigh Papp …
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Deep‐sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
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Succession in the petroleum reservoir microbiome through an oil field production lifecycle
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Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill
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Biocorrosive Thermophilic Microbial Communities in Alaskan North Slope Oil Facilities
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The Busy World of Deep Sea Eruptions
… Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve …
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