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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the … can be applied to any transcription factors or regulatory proteins that control transcription. Summary Transcription …
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Tracking the Origins of Methane-Producing Microbes
… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic methanogenesis and is …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long … metabolome analyses for C-fern that was able to shed some light on the mystery. They found over seven million …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers … signals we’re near the beach. For bacteria, that salty, slightly stinky air is a rich source of the sulfur they need … enzymes that fix nitrogen — nitrogenases — other enzymatic machinery harvests sulfur from gaseous organic sulfur …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … produces high amounts of oil and can grow with or without light. The relatively small size of its genome also simplifies metabolic modeling and pathway optimization for enhanced lipid production. Also notable, researchers …
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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