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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … that users can select to be engineered. “Piloting access to this emerging technology with JGI users will enable us to … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan …
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … especially relevant to living on a changing planet. In this short audio production, we’ll hear from Karolina … Community Science Project proposal with JGI, in which she’s studying a special kind of plant metabolism. This …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a single … reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics … and the quality of those genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field … genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present current and …
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JGI on the 2021 Highly Cited Researchers List
… among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields … and Tanja Woyke were among JGI staff who mentored students this past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science Graduate Student Research (SCGSR) Program. (Watch …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … virus:host dynamics in environmental microbial communities. This involves both experimental and computational …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … in honor of the occasion. To a packed conference room of this year’s program cohort, mentors, alumni, and other JGI …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for the global research … (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility …
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