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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four … allow them to better understand the impacts of drought on plant metabolism and particularly, what happens in the …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With … of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present … genomic sequence information to BER funded activities of plant systems. We will describe how to apply for a project …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly …
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Creating an Energy Market for Miscanthus
… What grass is a prized ornamental and a bioenergy plant? Meet Miscanthus , an attractive addition to your … biology and the economic terrain to help make the plant a viable alternative to fossil fuels. …
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Busting the Unbreakable Lignin
… evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … them down.  Lignin is a structural component for the plant, like the brick-and-mortar of a building or the human …
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How Filamentous Fungi Sense Food
… and decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow them … the wide array of simple and complex components present in plant biomass. This is of interest for bioenergy researchers …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into many more …
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Marine Microbe Contains Multitudes
… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … tend to stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, … , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, … Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of … of the groundwater were nearly cleared of contamination. By 2020, the water was at contamination levels that are below … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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An Earth Month Look at Sustainability Efforts at the JGI
… Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas emissions … ZERO Waste Initiative members took on another new effort: planting a potted sustainable garden outside the building. …
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