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… provides bioinformatics tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to develop and … reliability, thereby accelerating critical insights for the JGI User community. …

… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people all over the … have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  …

… of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. …

… yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … moved to a lower-salinity environment with how a control group responded when moved to an environment of comparable … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Interested in reading more JGI intern and mentor success stories? Read more below. …

… Janey provides support for custom single-cell user projects and projects within the group. …

… factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same … sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To demonstrate its utility, …

… The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were … JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better …

… Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … reference sequence of the complex switchgrass genome , using samples from common gardens growing across the …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform …