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… Microbial cells infected by viruses undergo metabolic reprogramming. The … from The Ohio State University and the University of Michigan studying how virus infections cause significant … is known about the impacts of these infections on ecosystem functions. As part of efforts to characterize global …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … down hardy plant cell walls and therefore hold clues to how humans could do the same on an industrial scale to produce … environment and transfer that ability into industry, specifically to generate biofuels,” Hess said.  (Only 90 of …

… Metagenome-assembled archaeal genomes provide new insights into … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … fluctuating environmental conditions. The team aims to functionally link gene families to photosynthesis and … a key role in the global carbon cycle. Tfaily’s team is specifically interested in conducting a controlled drought …

… (Berkeley Lab) describe a computational pipeline that can specifically scan for those snowflakes, or RNA virus … of viruses that infect not just crops, animals and humans, but also microbes whose presence or absence can … is the finding that “a few bacteria use CRISPR to defend against RNA,” Roux noted, “although it’s unclear why this is …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and … Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … Arkin, AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature …

… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades of …

… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …