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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from …
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Global overview and major challenges of host prediction methods for uncultivated phages
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Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System
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A bacterial metapopulation adapts locally to phage predation despite global dispersal
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … in between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species using a … also helped track and characterize the shifting waves of microbial communities involved in removing different …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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