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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment … their functional roles in their community. This study shows how the function-driven, single-cell screen can … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Ancient Algae Reveal Secrets of Plant Evolution
… conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key … as part of a startup grant of the University of Nebraska Lincoln, the Research & Artistry Award of Northern Illinois …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … Communication Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … studies. We also looked at the cross-species comparable study, where plants were subjected to three nitrogen sources …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … sphagnum  genomes from plants selected by a team from Duke University, then tested for heat and pH stress by Oak …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … aligned with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of … period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows that the way …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … from individual environmental cells. The proof of principle study built off earlier approaches and offered a way for researchers to study the planet’s microbial diversity, much of which …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … the analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . … ) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … subspecies variegata genomes allowed researchers to study the conservation and evolution of the genes … abundant in the drier parts of Australia with lower quality soils and even in the desert areas with poor rainfall. That …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … Lab). And one of the tools that researchers can apply to study the transcription factors that control how genes are … be used by itself, it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which …
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Tomas Tyml
… cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the …
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Cultivating Symbiotic Antarctic Microbes
… in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …
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