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A Collaboration to Improve Plant Genome Annotations Across Species
… JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In fact, HudsonAlpha Faculty … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … program at UC Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while … important to know who you're talking to and, like, know your audience and cater what you're saying to the audience, …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve Singer are … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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A Step Toward Controlling Soybean Rust
… As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … working to address some of the most pressing challenges of our time. For more information, please visit  …
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DAS Tool for Genome Reconstruction from Metagenomes
… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in … Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows how … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … effort led by researchers at Cornell University and scientists at the Joint Genome Institute, a DOE Office of … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Complex Confection Decoded: Sugarcane Reference Genome
… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area …
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