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JGIota: Looking Back at Methane-Making Microbes
… food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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Jasmyn Pangilinan
… Jasmyn provides bioinformatics tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to develop … reliability, thereby accelerating critical insights for the JGI User community. …
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Team Science Reveals Important Protein in Poplar
… for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… row]: John Sedbrook, Viktoria Steck, Ning Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic code … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … in part by grants from the Paul Allen Frontiers Group, the National Science Foundation Graduate Research Fellowships and …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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JGI-USCCN Strain Sequencing Opportunity
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First Monoploid Reference Sequence of Sugarcane
… sequence. For the highly polyploid sugarcane, an international team of researchers has successfully assembled a … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this … the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s …
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