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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. … now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of the National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL and external): $400  Industry: $450  … The NeLLi Symposium will take place at The Marjorie Barrick Museum of Art at the University … Interested NeLLi Symposium and Jamboree attendees can also register for activities …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … moved to a lower-salinity environment with how a control group responded when moved to an environment of comparable … The study was funded by Natural Sciences and Engineering Research …
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Three Join the JGI User Executive Committee
… Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris … and Marine Biology at UCSB, where she leads a research group investigating the physiology and evolution of marine …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated … On Jennifer Doudna's Nobel Prize … Berkeley Lab coverage …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data … all entities in the system. The JGI’s  Genomic Standards Group, which manages GOLD, communicates personally with … U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single … for collecting genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) … U.S. Department of Energy Joint Genome Institute (https:// …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly … studying Ca. T. magnifica in Tanja Woyke’s Single Cells Group to better understand what this sulfur-oxidizing, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems … in soil microbiomes could allow for more accurate ecosystem modeling. In a different vein, characterizing CRISPR defense …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same … This work was supported by the U.S. Department of Energy Office of Science under Contract No. …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. … the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To demonstrate its utility, … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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