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Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …

… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … positions at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria … Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., …

… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor …

Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots …

Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved … participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …

Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of … IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, taxonomic, and …

… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with …

… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a …

Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … Clum, A. et al. (2021)  DOE JGI metagenome workflow …