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Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
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JGI on the 2020 Highly Cited Researchers List
… that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … from samples provided by more than 200 scientists and sequenced by the JGI through the  Community Science Program, … they  conducted a large-scale comparison of 135 fungal sequenced genomes to understand how plants and fungi …
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A Community Resource for Secondary Metabolite Researchers
… time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The … agriculture. This comprehensive public repository of BGC sequences that come pre-annotated using multiple commonly …
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant …
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Plant Program
… manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these …
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User Programs
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said Igor … fungal guilds used to grow and metabolize nutrients. They sequenced all of the RNA found in soil samples, and …
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John Vogel
… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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