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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint … researcher Joseph Napier from the Juenger lab and computational biologist Paul Grabowski of HudsonAlpha outline the …
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the … activated cell sorting and non-standard molecular protocols.  Finally, his team utilizes new technologies, e.g. …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … that directly influence plant phenotype, such as secreted proteins. However,  M. elongata  seems to encourage the plant … the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … “Prokaryotes are not capable of producing all the juicy proteins and lipids that eukaryotes are.” But according to a … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … facilities that we worked with are cutting edge in terms of analysis and the fascinating results that we managed to …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the … program. The portfolio of research proposals integrates genomics with nanoscale science, all aimed at accelerating … their resources and capabilities to advance their DOE mission-relevant science.   Supported by the Biological and …
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Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and … The purpose of this Workshop is to illustrate the expansion of this field and bring it to the attention of the wider …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… bacteria, archaea and fungi. We thought this kind of analysis would provide a framework for the evolution of this … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … These enzymes are crucial for creating nucleic acids and proteins, as well as recycling nitrogen. Now, with insight …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks … and KBase will be co-located at Berkeley Lab’s Integrative Genomics Building (IGB). Click here to learn more about this …
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