Search

Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome … interpret different light cues by altering their growth program, and on how plants coordinate their gene expression … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … at Warp Drive Bio, and as a bioinformatics HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" … chat"-style podcast about natural products and the science and scientists of secondary metabolism. … PhD in …

Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …

… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … positions at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria … Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., …

… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor …

Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots …

Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved … participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …

Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of … IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, taxonomic, and …

… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with …