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An Enzyme System to Help Catalyze Bioproduction of Plastic
… sulfur compounds, and now we can see we can go beyond that into propanol, propylene, and even larger hydrocarbons that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Tracking the Origins of Methane-Producing Microbes
… published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at … Vienna, where he first stumbled from software development into building productive infrastructure in close …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … a video about the Biotech Partner summer interns at the JGI. What did you do for your summer vacation? …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… published in  The Proceedings of the National Academy of Sciences bridges this gap, by tracing the evolution of a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … proteins, as well as recycling nitrogen. Now, with insight into a specific enzyme class that’s important to the way …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual … by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders … and graduate students from UC Merced with at least one JGI mentor. Together, they work through a specific project …
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JGIota: Looking Back at Methane-Making Microbes
… and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating … year 2026, in partnership with the Environmental Molecular Sciences Laboratory (EMSL) and other national user … of Energy Office of Science National User Facilities into their research. Applicants can also request access to …
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Boosting Small Molecule Production in Super “Soup”
… yeast cells but then moves out of the cell structure into a cell-free system. The work complements efforts to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGIota: Looking Back at Sequencing for Soybeans
… could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the … a full genome sequence, researchers have been able to look into soybean’s strengths – along with a fungus that …
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