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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? A: The JGI is not a funding … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on … at the University of Delaware. His lab is interested in how microbial communities can efficiently degrade complex …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the … interact below the ground, influencing the production of microbial greenhouse gases and volatile organic compounds. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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JGI Announces 2025 New Investigator Portfolio
… Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, … in the November 2025 review. You can also find more information about the JGI’s  various proposal calls here. …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea … three Genome Watch articles. “Given the great expertise in microbial genomics and metagenomics of the …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … in how general environmental stressors, um, alter microbial biomass and then what the consequences are for the …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at the University of California …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future research. Hear from Rekha …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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