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A Grass Model to Help Improve Giant Miscanthus
… The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are increasing their yields and … miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Comparative genomics reveals insights into characterization and distribution of quorum sensing-related genes in Shewanella algae from marine environment and clinical sources
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Computationally Classifying Fungal Lifestyles
… nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Summary A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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Silver age of GOLD introduces new features
… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Introducing New Members of the JGI User Executive Committee
… of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … He also wants to assist JGI in extending its activity-based cell sorting pipelines to further the link between cellular … shaping the assembly of fungal endophytes across land plants and lichens, mentioned her interest in guiding JGI …
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Expanding Virophage Diversity
… with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses … & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … were found in diverse habitats including the air, plant rhizosphere, wastewater, and even animal and human …
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