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Partners
The JGI leverages its existing partnerships and develops others providing complementary expertise to … as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA …
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … features prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … Huber and Sebastien Ferreira-Cerca, and sequencing of MSI metagenomes within the Census of Deep Life Sequencing call …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on Microbial Root … Cross …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … Plants that the zealexin pathway has an “hourglass” shape with diverse precursors in, and many different products out, …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … what makes polar photosynthesizers tick. He’s working with researchers at the U.S. Department of Energy (DOE) … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins on … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … stable isotope probing (DNA SIP) relies on incubating DNA with isotopically-labeled compounds to link active microbes …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for … 12, 2022. Faculty interested in developing proposals with JGI and Biosciences Area researchers should contact …
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