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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. … Google Scholar. … Education … Awards and Honors … Selected Publications …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … to produce good yields under water limiting conditions. Epigenetic Control of Drought Response in Sorghum (EPICON) is a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field … The video complements a recently published paper with first author Amundson in the journal Microbiome . The …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial … carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between … successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. …
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