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PhycoCosm Tutorial
… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
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JGI Announces 2023 Community Science Program Awardees
… Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of which are …
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2023 Progress Report
… we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high … Winner” — “Piggyback the Winner.” In the microbial mat, the data suggest viruses are indeed piggybacking their hosts. … terrestrial environment with low mobility. The metagenomic data suggests that viruses don’t diffuse well through the …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, …
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Jeremy Schmutz
… simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, … genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, … agronomically valuable loci. Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic diversifications of five …
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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Adopt-A-Genome
… write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… group at Oak Ridge National Laboratory, he has started a new position as the Senior Manager, Machine Learning at …
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