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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … to define the structure and function of a unique cyanobacterial protein and understand its role in photosynthesis. …
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Virus-Microbe Interactions of Mud Island Mangroves
… program , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. Baker had worked with … research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove wetlands in …
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JGI & KBase at PAG XXVII
Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics research. Click here to …
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JGI@25: From Life at the Extremes to Editing Genomes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of the University of California (UC), … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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JGI@25: Studying Sorghum’s Survival Skills
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its drought and flood hardiness. … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … of the continental United States, occasionally pulling over to the side of the road to collect small weedy plants and bring them back to the …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … of these methanogenic microorganisms was narrowed to a type of archaea called  Euryarchaeota . These ancient, … devoid of oxygen and until recently were thought to be the only microorganisms capable of methanogenesis —  …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth … in fungal genetics and evolution, he helps manage the Bacterial-Fungal Interactions Science Focus Area. He has …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute … networking opportunities and fosters discussions on how to capture and characterize viral diversity, understand the … of experimental approaches and large-scale data analysis to better characterize how viruses infect soil microbes and …
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Access to Rock Star Scientists
… of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial … “The summer internship has further confirmed by desire to pursue a STEM career, specifically in a government lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … environmental challenges. Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy plant cell walls and therefore hold …
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JGI@25: Solving the Mystery of the Missing Oil
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array … identification of a new “oil-seeking” species related to Oceanospirillales , work that also involved Janet Jansson’s …
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