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JGI@25: From Life at the Extremes to Editing Genomes
… past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… in urine to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … highlights an  ongoing partnership that combines the JGI’s genomic capabilities with the Foundry’s nanoscale materials … Contract No. DE-AC02-05CH11231. This research was developed with funding from the Defense Advanced Research Projects …
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Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tāpirins) from Extremely Thermophilic Caldicellulosiruptor Species.
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… This portfolio accelerates bioenergy innovation through genomic discovery across diverse organisms and ecosystems. … next-generation feedstocks through CRISPR-edited poplars with optimized lignin, engineering heat-resilient algae for … (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. …
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JGI User Executive Committee Expands
… and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study span the … genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … a job site for a task that requires a flathead screwdriver with a full toolbox including Phillips and specialty … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently …
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JGI Announces 2025 New Investigator Portfolio
… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … Science Program , allows us to work and share our tools with a widening circle of researchers whose work aligns with … will investigate a diverse array of projects, including the genomic dynamics of biofuel-producing fungi, the effects of …
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