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JGI Announces 2026 New Investigator Portfolio
… accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … metatranscriptomics and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered … are potential sustainable sources of alternative fuels, so understanding fungal-bacterial relationships can shed light …
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows how … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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New and Improved: Eucalyptus Reference is Now Accessible
… to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant … understand the genetic structural diversity of the genus. Understanding all the gene variants and how they interact …
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … poop.  “As an engineer, I think of poop as a biotech resource,” O’Malley said as she opened her talk at the  2022 …
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