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New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By …

Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels …

Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, … novel flow cytometry protocols for targeted recovery of specific microbes. …

Stable Isotope Probing (SIP) is a powerful technique for studying microbial … and even how quickly. But there's a catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to …

… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe …

Tracing gene regulatory networks in the model fungus  Neurospora … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that are …

Understanding the shared genetic toolkit of ancestral and present-day … plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for …

Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … academic achievements (2008) … Education … Selected Publications … Awards and Service …

… and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … viral diversity. “Although the technical challenges of data analysis at this scale are formidable.” Computational Sieves … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational …