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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Promoting the Power of Viral Metagenomics
… published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people … viruses that were present in the sample. From these data it is possible to answer a wide variety of important …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… switchgrass gardens to track crop productivity across 1,100 miles and eight states. In 2021, using switchgrass … at the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …
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A Natural Mechanism Can Turbocharge Viral Evolution
… has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only widespread, … diversity quickly, allowing these viruses to target new microbial prey. The Impact This research provides a much … support for the IsoGenie Project (samples and metadata from Stordalen Mire, Sweden) by the Genomic Science …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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On the origin of bird’s nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota)
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for …
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JGI-UC Merced Interns Share Their 2021 Experiences
… in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for the first … Making Big Data Metagenomic Clustering Scalable …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… John Sedbrook, Viktoria Steck, Ning Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A total of … advanced genomic capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) …
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SIPs with Standards
… more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …
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