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… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more than 80 percent found to be … This work was supported by the International Consortium for Sugarcane …

… To provide broad plant genomic capabilities, the DOE Joint Genome … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … on a few species like Arabidopsis or rice as homology models for computational function predictions and also due …

… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … of JGI and ExaBiome Project team, supported by the DOE Exascale Computing Project. The award recognized the release … in scale when running on DOE’s  exascale computing systems,” added Kathy Yelick, a professor of electrical …

… For the first time, a team has comprehensively described host-virus dynamics in … the predator-prey dynamics in these mats helps constrain models that estimate biogeochemical fluxes. Summary Previous … Contract No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology Institute Rock Powered Life grant. RS is …

… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an upcoming … sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …

… [Pictured from left to right are: [Above] Sara Branco, Asdrubal Burgos, Posy Busby, Hao … through genomic discovery across diverse organisms and ecosystems. Scientists are engineering next-generation …

… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, Michael Borg, Rory Craig, Nicholas Darci-Maher, Lital Davidi, Colleen J. Doherty, Adrian A. … microbial and plant metabolism across diverse ecosystems — from Antarctic soils and Icelandic hydrothermal …

… Understanding how a fundamental mechanism of evolution allows … they are, and the roles that they might play in the wild, hasn’t been clear. Now, to answer these questions, a team led … at Lawrence Berkeley National Laboratory (Berkeley Lab), has looked for DGRs in a broad range of publicly available …

… Sequencing technology has changed dramatically over the last  25-plus years since … Large metagenomic surveys could lead to better predictive models of global climate. They may also provide a basic … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …

… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms … Berkeley National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an …

… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more … experiment outlines a roadmap that is transferable to other systems, expanding the technologies available for other JGI … This work was funded by the Air Force Office of Scientific Research …

… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … roster of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who … Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would like to help advance JGI …