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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … approaches for manufacturing bioproducts and biofuels . This first report of their work, supported through the … of sustainable chemical products,” said Jewett, one of the study’s senior authors. “But this has been done most …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … categories: Catalog the human virome; Develop tools to study the human virome; Explore how the human virome … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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Waiting to Respire
… development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … using samples collected at these gardens. Building off this work, researchers at three DOE Bioenergy Research … biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the plant’s genome …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … community with large-scale advanced genomic capabilities. This year we brought online the latest short-read … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …
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Astrovirology: how viruses enhance our understanding of life in the Universe
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Extreme dimensions — how big (or small) can tailed phages be?
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take the …
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Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
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