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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … PIs who have not led any previously-accepted proposals — through the New Investigator call under our Community …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … Laboratory (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities … user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; hydrobiogeochemistry; … and the National Ecological Observatory Network (NEON) through the National Science Foundation (NSF). In …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … directly from the environment and focuses on sequence reads to link mobile elements such as plasmids to microbial … be the foundation upon which researchers can develop high-throughput and high-resolution studies of interactions …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … genome sequences for members of the microbial world through bulk community sequencing (metagenomics) and … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … JGI’s operations). At the JGI, that translated to sorting through the stuff accumulated in offices, labs, lockers, and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, well-lit … This research was supported by grants from the Simons Foundation …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis … Laccaria bicolor on MycoCosm … Laccaria bicolor has a symbiotic relationship with poplar …
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