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JGI Launches Latest Strategic Plan
… over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … to begin a month later. In parallel with the intricate move preparations, the JGI has released its newest 5-Year … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were sequenced by … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun …
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Jeremy Schmutz
… 5, 16, and 19. Following the completion of the human genome project in 2003, he developed sequencing, assembly, and … relevant cellulosic feedstocks. Schmutz provides scientific project management for the reference eukaryotic genomes … by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In addition to …
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Forming Scientific Connections and Building Community
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … below are the interns, their mentors, and their summer projects. Each intern also mentioned what they loved about …
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To view the …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the DOE Joint BioEnergy Institute, are … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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Scaling Up Existing Skill Sets
… anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … researchers and help expand or develop more internship programs like the JGI Internship Program during my STEM … Overcoming a huge learning curve to utilize several programs in my project was worth it whenever I was able to …
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How Maize Makes An Antibiotic Cocktail
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program . And …
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Ray Turner Completes Last Tour of Lab Duty at JGI
Officer). “You define the word ‘collegial’” “Every user facility at this Laboratory needs to have a great … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … to the ever-shifting landscape of funding Federal for programs, noted that “Ray is someone who just will get it …
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Viruses Reprogram Cells into Different Virocells
… in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the …
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