Search

… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and …

… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives highlighted … After working on his post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National …

… Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …

… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) …

… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … can show reviewers the team is really able to take advantage of the data and work with the data. Q: How would you … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… the brown rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans …

… JGI researchers lend expertise to develop tools and data hub … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol …

… One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … user facilities located at Berkeley Lab, including the JGI, the National Energy Research Scientific Computing …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …

… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like …