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… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed … assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large … de novo plant assembly and the post-genome computational analysis at HudsonAlpha. …

… Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library …

… changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … and combining the information with previously published datasets. The work was  recently published in the journal  … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for …

… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data …

… Describing the largest analysis to date of the modified DNA base 5mC variations in … the need for a more comprehensive exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … and that’s going really well. And having the sequence data available for us to enable that research will have a … Plant Datasets …

… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational … Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the …

… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute … and improve functional annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team …

… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell …