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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the … of breeding into cotton,” said Schmutz, who heads JGI’s Plant Program. He and Grimwood were also part of the JGI …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Systems group. Tringe’s research group focuses on the roles of microbial communities in wetland carbon cycling and the interactions of plants with their associated microbiomes. Tringe was also … metabolism, work on which she will expand with her study of microbes in California’s manmade water transport canals. …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… and the use of laboratory resources. Capacity for the plant growth chamber is limited so that will have to be …
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Doubling Down on Known Protein Families
… Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … protein families and novel functions in as-yet unveiled microbes. Harnessing the collective power of more than … boundaries by applying AI methodologies to unravel their roles,” Pavlopoulos said. “Consequently, we have amassed an …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… approaches to unravel functional capabilities of plants, microbes and microbial communities, and …
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JGI on the 2021 Highly Cited Researchers List
… and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, and functionally …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… a complex pattern of evolution for genes related to eating plant compounds in both the oceanic and hot spring  … bacteria lack complete biochemical pathways to break down plant material on their own, they likely cooperate with … that the bacteria have enzymes to synthesize or degrade plant hormones, meaning its land-dwelling counterparts could …
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Scaling Up Existing Skill Sets
… internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer … UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon … At HudsonAlpha, she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … Setaria viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of …
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Computationally Classifying Fungal Lifestyles
… nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and … clusters showed a >95 % accuracy in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S …
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Defining a Pan-Genome for Antarctic Archaea
… and researchers are interested in learning how these microbes have learned to adapt from marine to hypersaline … extent of the Antarctic microbial pan-genome. Since these microbes thrive under extreme temperature and salinity …
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