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…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 150 archaeal viruses had been previously identified. The JGI researchers surveyed publicly available data in the …

… Researchers at the JGI develop a tool to quickly and accurately identify … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing Center (NERSC) …

…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile … Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …

… Back in 2011, JGI-supported researchers published a paper in the journal … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …

… from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… Populations of Antarctic lake microbial communities change with … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …

… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … was performed by Danielle Goudeau and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly …

… Harnessing BER-funded data resources, researchers built an interactive and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …