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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, … Udwary DW, Otani H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen … DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in … for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell types in the plant …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. Together, … other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. … pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado State University GI users …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of … Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA Synthesis Platform Ben …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to … designed to attract specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the … The team first tested the approach on bacterial laboratory models to set a reference for its performance, and then …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) … nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in … This work was supported by the Australian Research Council …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi … transcriptional network mapping, developing microbial systems to convert renewable feedstocks into advanced … integrate cutting-edge genomic data with predictive modeling and bioengineering to advance U.S. energy …
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Frederik Schulz
… Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … LDRD-funded project, Dr. Schulz established a single-cell-based discovery pipeline and enrichment metagenomics for … ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a DTRA-funded …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community … to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to global biogeochemical … Three are previous collaborators, though have never served as a principal investigator. The other seven researchers are …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his … work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David …
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