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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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Trent Northen
… in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Effects of Polar Light Cycle on Microbial Food Web
… long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … observations regarding the contributions of algae and viruses to the ecosystem were noted, but require further …
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Fishing for Novel Cellulose Degraders
… led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … cellulases from their captured genomes, the team then used DNA synthesis and cloning, followed by protein in vitro … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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New and Improved: Eucalyptus Reference is Now Accessible
… The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … to the efforts of the  U.S. Department of Energy (DOE) Office of Science Biological and Environmental Research … Africa. The South African team collected the plant tissues. DNA and RNA sequencing were conducted by the JGI, along with …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have … outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata …
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Building Wet and Dry Lab Skills
… year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … the plants to harvesting the plants and extracting DNA. They also analyzed 16s amplicon data to determine … on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… intimate, dynamic interactions, offering an unparalleled platform for exchanging ideas, forming collaborations, and …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… led by UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional testing of …
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2025 NeLLi Symposium
… LBNL students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las … JGI Organizers …
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